Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870524.1_cds_XP_016434124.1_30214
CDS Infomation

[gene=LOC107760567] [db_xref=GeneID:107760567] [protein=E3 ubiquitin-protein ligase At4g11680-like] [protein_id=XP_016434124.1] [location=join(9375..9886,10741..11092,11702..11848)] [gbkey=CDS]
Sequence

ATGAATACACGATACTTTCTTACACCAGTGTCGCTTTGTCATTCGAGCATTATTGTATCT
TTCCCACCAATGATTTCACCAGCAGCAGGAGATGGAAGAATGTCTAGCGGGGGAGGAACT
AGAAACAGGTCTATTCGGAATATTTCCCATTCTTCATTCTTAATAAGAATGTCCATGAGA
ATATCAAGATCAAGGTGGTTTAGTTTCCTAAGAAGGGTTTTCCACTACCAGAATGGCTCA
AGATCTGATCTTGGATCAAATCCCTTCAATTCAATGACTTGGATGATGATGGAGTGCATT
GCATTAAGTGTCCAAATAATTATAGCCTCATATACACTGACTGTTTCAAAGGAAGAGAAG
CCAGTTTGGCCAATGAGGATATGGGTGTTGGGATATGCCTTTGGCTGTATTATTAGTGTC
ATGTTGCTTTACTGGCGCTACTGGGCGTTCTATGTGAGGCCACAAAGAGATGATTCTGAC
ATGGAGCAACAAAGAAGCCATGATGAATCCAGGGCATTGCATGTGATGGAGAAATTCAGG
ACTGGTGTTGAGCTATTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGGTGTTCGAA
TCGCGCTTTTTATCTTACCATCGTGCTCCTAAACTTCACTTGCTCTGCATCTCACTGCTA
GCTTGGAATGCTGTCACCTACTCTTTCCCCTTCCTATTGTTTCTATTGTTGTGCTGCTGT
GTCCCAATTCTGAGTAGCTTTTTAGGCTACAACATGAACATGGGATCCGTAGATAGAGGG
GCTTCTGATGAACAACTCTCCAGTCTACCCAGTTGGAAGTACAAGGAATGTGGAAACAAG
GAACAACCCACAAGTGAAAATGTGGAATGTTGTATATGCTTAGCAAAGTACGGAGATAAG
GAAGAGATCAGACAATTACCTTGTTCTCATATATTTCATCTTAAGTGTGTGGACCAATGG
CTTAGAATTATATCTTGCTGCCCTCTCTGCAAACAAGAACTGGAGAGGTAA

Peptide Sequence

PEP ID

XP_016434124.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Nicotiana tabacum]
Sequence

MNTRYFLTPVSLCHSSIIVSFPPMISPAAGDGRMSSGGGTRNRSIRNISHSSFLIRMSMR
ISRSRWFSFLRRVFHYQNGSRSDLGSNPFNSMTWMMMECIALSVQIIIASYTLTVSKEEK
PVWPMRIWVLGYAFGCIISVMLLYWRYWAFYVRPQRDDSDMEQQRSHDESRALHVMEKFR
TGVELFFAIWFVMGNVWVFESRFLSYHRAPKLHLLCISLLAWNAVTYSFPFLLFLLLCCC
VPILSSFLGYNMNMGSVDRGASDEQLSSLPSWKYKECGNKEQPTSENVECCICLAKYGDK
EEIRQLPCSHIFHLKCVDQWLRIISCCPLCKQELER

Transcript Sequence

Gene sequence data has not been registered.